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A
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B
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C
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D
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F
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G
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I
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L
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O
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P
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R
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S
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T
A
Analysis (class in spotlob.process_steps)
apply() (spotlob.process.SpotlobProcessStep method)
apply_all_steps() (spotlob.pipeline.Pipeline method)
apply_at_stage() (spotlob.pipeline.Pipeline method)
apply_from_stage_to_stage() (spotlob.pipeline.Pipeline method)
apply_outdated_up_to_stage() (spotlob.pipeline.Pipeline method)
B
batchprocess() (in module spotlob.batch)
Binarization (class in spotlob.process_steps)
BinaryThreshold (class in spotlob.process_opencv)
C
CircleAnalysis (class in spotlob.analyze_circle)
ContourFinder (class in spotlob.process_opencv)
ContourFinderSimple (class in spotlob.process_opencv)
Converter (class in spotlob.process_steps)
D
default_pipeline() (in module spotlob.defaults)
do_process_at_stage() (spotlob.spim.Spim method)
F
FeatureFilter (class in spotlob.process_steps)
FeatureFinder (class in spotlob.process_steps)
FeatureFormFilter (class in spotlob.process_opencv)
from_file() (spotlob.pipeline.Pipeline class method)
(spotlob.spim.Spim class method)
func_at_stage() (spotlob.spim.Spim method)
G
GaussianPreprocess (class in spotlob.process_opencv)
get_at_stage() (spotlob.spim.Spim method)
get_data() (spotlob.spim.Spim method)
GreyscaleConverter (class in spotlob.process_opencv)
I
image (spotlob.spim.Spim attribute)
is_interactive() (in module spotlob.batch)
is_off_border() (spotlob.process_opencv.FeatureFormFilter method)
L
LineAnalysis (class in spotlob.analyze_line)
O
OtsuThreshold (class in spotlob.process_opencv)
P
parameter_from_spec() (in module spotlob.parameters)
partial_read() (spotlob.process_opencv.TifReader method)
Pipeline (class in spotlob.pipeline)
PostprocessNothing (class in spotlob.process_opencv)
Postprocessor (class in spotlob.process_steps)
Preprocessor (class in spotlob.process_steps)
preview() (spotlob.process.SpotlobProcessStep method)
(spotlob.process_opencv.TifReader method)
(spotlob.process_steps.Analysis method)
(spotlob.process_steps.Binarization method)
(spotlob.process_steps.Converter method)
(spotlob.process_steps.FeatureFilter method)
(spotlob.process_steps.FeatureFinder method)
(spotlob.process_steps.Postprocessor method)
(spotlob.process_steps.Preprocessor method)
R
Reader (class in spotlob.process_steps)
replaced_with() (spotlob.pipeline.Pipeline method)
S
save() (spotlob.pipeline.Pipeline method)
SimpleReader (class in spotlob.process_opencv)
Spim (class in spotlob.spim)
SpimStage (class in spotlob.spim)
spotlob.analyze_circle (module)
spotlob.analyze_line (module)
spotlob.batch (module)
spotlob.parameters (module)
spotlob.pipeline (module)
spotlob.process (module)
spotlob.process_opencv (module)
spotlob.process_steps (module)
spotlob.register (module)
spotlob.spim (module)
SpotlobProcessStep (class in spotlob.process)
T
TifReader (class in spotlob.process_opencv)
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